1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00039p00163600

AMTR_s00039p00163600 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00039.119

Description : Solute transport.carrier-mediated transport.MFS superfamily.BT1 small solute transporter


Gene families : OG0001909 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001909_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00039p00163600
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
AT1G04570 No alias Major facilitator superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G64890 No alias Major facilitator superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g14554 No alias small solute transporter *(BT1) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18045 No alias small solute transporter *(BT1) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02185 No alias small solute transporter *(BT1) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15964 No alias small solute transporter *(BT1) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g18078 No alias small solute transporter *(BT1) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g51009 No alias small solute transporter *(BT1) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13011 No alias small solute transporter *(BT1) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g21997 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity IEP HCCA
MF GO:0003913 DNA photolyase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0015939 pantothenate metabolic process IEP HCCA
BP GO:0015940 pantothenate biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004324 FBT 12 486
No external refs found!