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  5. AMTR_s00039p00148640

AMTR_s00039p00148640 (ATCLASP, CLASP,...)


Aliases : ATCLASP, CLASP, evm_27.TU.AmTr_v1.0_scaffold00039.100

Description : Cell cycle.cytokinesis.preprophase microtubule organization.CLASP microtubule orientation regulator


Gene families : OG0001377 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001377_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00039p00148640

Target Alias Description ECC score Gene Family Method Actions
AT2G20190 ATCLASP, CLASP CLIP-associated protein 0.02 OrthoFinder output from all 47 species
Adi_g055870 ATCLASP, CLASP not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g086375 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.02 OrthoFinder output from all 47 species
Adi_g103012 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.02 OrthoFinder output from all 47 species
Adi_g119357 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02715 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.03 OrthoFinder output from all 47 species
Aob_g15316 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene00540.t1 ATCLASP, CLASP,... microtubule orientation regulator *(CLASP) & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000144.157 No alias No description available 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000863.40 No alias CLIP-associated protein OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre03.g154425 ATCLASP, CLASP CLIP-associated protein OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dcu_g08319 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.07 OrthoFinder output from all 47 species
Dde_g10526 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g26939 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01028491001 ATCLASP, CLASP CLIP-associated protein OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01028493001 ATCLASP, CLASP Cell cycle.cytokinesis.preprophase microtubule... 0.06 OrthoFinder output from all 47 species
GSVIVT01028494001 ATCLASP, CLASP CLIP-associated protein OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_32967 ATCLASP, CLASP microtubule orientation regulator (CLASP) 0.05 OrthoFinder output from all 47 species
Gb_32968 ATCLASP, CLASP microtubule orientation regulator (CLASP) 0.03 OrthoFinder output from all 47 species
Gb_32969 ATCLASP, CLASP CLIP-associated protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_32971 ATCLASP, CLASP CLIP-associated protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g42840.1 ATCLASP, CLASP,... microtubule orientation regulator (CLASP) 0.05 OrthoFinder output from all 47 species
Len_g12938 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.04 OrthoFinder output from all 47 species
MA_7498912g0010 ATCLASP, CLASP CLIP-associated protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp4g01070.1 ATCLASP, CLASP microtubule orientation regulator (CLASP) 0.04 OrthoFinder output from all 47 species
Nbi_g05012 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.04 OrthoFinder output from all 47 species
Ppi_g05351 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.02 OrthoFinder output from all 47 species
Solyc06g008040.3.1 ATCLASP, CLASP,... microtubule orientation regulator (CLASP) 0.05 OrthoFinder output from all 47 species
Solyc09g063030.4.1 ATCLASP, CLASP,... microtubule orientation regulator (CLASP) 0.02 OrthoFinder output from all 47 species
Tin_g03553 ATCLASP, CLASP microtubule orientation regulator *(CLASP) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e007629_P001 ATCLASP, CLASP,... microtubule orientation regulator (CLASP) 0.06 OrthoFinder output from all 47 species
Zm00001e041199_P003 ATCLASP, CLASP,... microtubule orientation regulator (CLASP) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
CC GO:0000922 spindle pole IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005815 microtubule organizing center IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006470 protein dephosphorylation IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR000357 HEAT 160 186
IPR024395 CLASP_N_dom 288 503
IPR024395 CLASP_N_dom 815 1005
No external refs found!