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  5. AMTR_s00039p00129550

AMTR_s00039p00129550 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00039.82

Description : Protein LOW PSII ACCUMULATION 1, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0007862 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007862_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00039p00129550
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
AT4G28740 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.05 OrthoFinder output from all 47 species
Aev_g02215 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07202 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0092.g042977 No alias not classified & original description: CDS=66-1103 0.04 OrthoFinder output from all 47 species
Ceric.32G001900.1 Ceric.32G001900 not classified & original description: pacid=50598721... 0.03 OrthoFinder output from all 47 species
Cre06.g266900 No alias Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.05 OrthoFinder output from all 47 species
Dac_g07193 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09067 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g01177 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp7g15330.1 No alias Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.03 OrthoFinder output from all 47 species
Nbi_g39606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19021 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g02058 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013941 No alias not classified & original description: CDS=1-1122 0.05 OrthoFinder output from all 47 species
Sam_g11106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g063140.4.1 Solyc09g063140 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Spa_g22705 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g00565 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEP HCCA
InterPro domains Description Start Stop
IPR021883 LPA1-like 58 135
No external refs found!