1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00039p00041910

AMTR_s00039p00041910 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00039.14

Description : Solute transport.carrier-mediated transport.PAM71 manganese/calcium cation transporter


Gene families : OG0000681 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000681_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00039p00041910

Target Alias Description ECC score Gene Family Method Actions
Cba_g17433 No alias manganese/calcium cation transporter *(BICAT) & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000711.67 No alias Protein PAM71-homolog, chloroplastic OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Len_g08558 No alias manganese/calcium cation transporter *(BICAT) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0079.g017813 No alias manganese/calcium cation transporter *(BICAT) & original... 0.02 OrthoFinder output from all 47 species
Sam_g13196 No alias manganese/calcium cation transporter *(BICAT) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e004144_P003 Zm00001e004144 manganese/calcium cation transporter (BICAT) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004779 sulfate adenylyltransferase activity IEP HCCA
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR001727 Gdt1 289 341
IPR001727 Gdt1 160 238
No external refs found!