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  5. AMTR_s00038p00212100

AMTR_s00038p00212100 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00038.171

Description : Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana


Gene families : OG0000717 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000717_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00038p00212100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00115860 evm_27.TU.AmTr_v1... Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
AT3G54770 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.01 OrthoFinder output from all 47 species
LOC_Os02g51890.1 LOC_Os02g51890 Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_18853g0020 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g19046 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g04772 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0143.g022907 No alias not classified & original description: CDS=590-1630 0.01 OrthoFinder output from all 47 species
Solyc04g082770.4.1 Solyc04g082770 Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g47542 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e023856_P001 Zm00001e023856 Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0009987 cellular process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 13 70
No external refs found!