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  5. AMTR_s00038p00161690

AMTR_s00038p00161690 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00038.99

No description available


Gene families : OG0001517 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001517_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00038p00161690
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
AT1G22250 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.08 OrthoFinder output from all 47 species
AT1G78170 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.06 OrthoFinder output from all 47 species
AT4G08910 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.14 OrthoFinder output from all 47 species
Aev_g02060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g20400 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g23622 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01453 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g02339 No alias regulatory protein *(CFL) of cutin and suberin... 0.03 OrthoFinder output from all 47 species
Aspi01Gene10926.t1 Aspi01Gene10926 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0277.g061498 No alias not classified & original description: CDS=447-1262 0.02 OrthoFinder output from all 47 species
Ehy_g04400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013547001 No alias No description available 0.08 OrthoFinder output from all 47 species
Gb_35362 No alias CFL cutin and suberin biosynthesis regulator 0.09 OrthoFinder output from all 47 species
LOC_Os11g18940.1 LOC_Os11g18940 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g29579 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g07632 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g35720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02856 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003730 No alias not classified & original description: CDS=19-150 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003742 No alias not classified & original description: CDS=3-662 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011899 No alias not classified & original description: CDS=223-897 0.03 OrthoFinder output from all 47 species
Sam_g12264 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19849 No alias regulatory protein *(CFL) of cutin and suberin... 0.02 OrthoFinder output from all 47 species
Sam_g34575 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo407839 No alias No description available 0.05 OrthoFinder output from all 47 species
Solyc04g074080.3.1 Solyc04g074080 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e038823_P001 Zm00001e038823 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!