Aliases : RPT3, NPH3, JK218, evm_27.TU.AmTr_v1.0_scaffold00038.93
Description : Root phototropism protein 3 OS=Arabidopsis thaliana
Gene families : OG0000449 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000449_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00049p00216130 | evm_27.TU.AmTr_v1... | BTB/POZ domain-containing protein At1g67900... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00061p00175030 | evm_27.TU.AmTr_v1... | BTB/POZ domain-containing protein At5g47800... | 0.04 | OrthoFinder output from all 47 species | |
AT1G67900 | No alias | Phototropic-responsive NPH3 family protein | 0.03 | OrthoFinder output from all 47 species | |
AT2G14820 | NPY2 | Phototropic-responsive NPH3 family protein | 0.05 | OrthoFinder output from all 47 species | |
AT3G26490 | No alias | Phototropic-responsive NPH3 family protein | 0.02 | OrthoFinder output from all 47 species | |
AT4G31820 | MAB4, NPY1, ENP | Phototropic-responsive NPH3 family protein | 0.04 | OrthoFinder output from all 47 species | |
AT5G10250 | DOT3 | Phototropic-responsive NPH3 family protein | 0.05 | OrthoFinder output from all 47 species | |
AT5G64330 | RPT3, NPH3, JK218 | Phototropic-responsive NPH3 family protein | 0.06 | OrthoFinder output from all 47 species | |
Adi_g015967 | MAB4, NPY1, ENP | substrate adaptor *(NPY) of CUL3-BTB E3 ubiquitin ligase... | 0.02 | OrthoFinder output from all 47 species | |
Ala_g32547 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.04 | OrthoFinder output from all 47 species | |
Aob_g05273 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.02 | OrthoFinder output from all 47 species | |
Aob_g19940 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene08949.t1 | Aspi01Gene08949 | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene09339.t1 | RPT3, NPH3,... | substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene23539.t1 | Aspi01Gene23539 | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0003.g008062 | RPT3, NPH3, JK218 | not classified & original description: CDS=1270-3795 | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0076.g037787 | No alias | not classified & original description: CDS=431-2302 | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0116.g046412 | No alias | not classified & original description: CDS=1316-3601 | 0.05 | OrthoFinder output from all 47 species | |
Cba_g15372 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.11G059700.1 | Ceric.11G059700 | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.32G010700.1 | Ceric.32G010700 | not classified & original description: pacid=50597870... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.34G006100.1 | Ceric.34G006100 | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
Gb_04489 | No alias | BTB/POZ domain-containing protein At1g67900... | 0.02 | OrthoFinder output from all 47 species | |
Gb_41063 | RPT3, NPH3, JK218 | Root phototropism protein 3 OS=Arabidopsis thaliana... | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os02g35970.1 | RPT3, NPH3,... | component NPH3 of CUL3-BTB E3 ubiquitin ligase complex | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os03g41350.2 | NPY2, LOC_Os03g41350 | BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os09g09370.2 | LOC_Os09g09370 | BTB/POZ domain-containing protein At5g47800... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g02246 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g10716 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.02 | OrthoFinder output from all 47 species | |
MA_135496g0010 | RPT3, NPH3, JK218 | Root phototropism protein 3 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
MA_52004g0010 | RPT3, NPH3, JK218 | component NPH3 of CUL3-BTB E3 ubiquitin ligase complex | 0.07 | OrthoFinder output from all 47 species | |
Nbi_g04882 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g03108 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g06471 | RPT3, NPH3, JK218 | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0070.g016653 | RPT3, NPH3, JK218 | substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g38846 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g39393 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g098820.3.1 | RPT3, NPH3,... | Coleoptile phototropism protein 1 OS=Oryza sativa subsp.... | 0.04 | OrthoFinder output from all 47 species | |
Spa_g39095 | MAB4, NPY1, ENP | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g47140 | No alias | substrate adaptor of CUL3-based E3 ubiquitin ligase... | 0.02 | OrthoFinder output from all 47 species | |
Tin_g01088 | No alias | substrate adaptor of CUL3-based E3 ubiquiTin ligase... | 0.02 | OrthoFinder output from all 47 species | |
Tin_g07210 | No alias | substrate adaptor of CUL3-based E3 ubiquiTin ligase... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e003063_P004 | NPY2, Zm00001e003063 | BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e005126_P001 | NPY2, Zm00001e005126 | BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e014883_P001 | RPT3, NPH3,... | component NPH3 of CUL3-BTB E3 ubiquitin ligase complex | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004180 | carboxypeptidase activity | IEP | HCCA |
MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | HCCA |
MF | GO:0008171 | O-methyltransferase activity | IEP | HCCA |
MF | GO:0008238 | exopeptidase activity | IEP | HCCA |
MF | GO:0070008 | serine-type exopeptidase activity | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR027356 | NPH3_dom | 274 | 519 |
No external refs found! |