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  5. AMTR_s00038p00146240

AMTR_s00038p00146240 (UBC5,...)


Aliases : UBC5, evm_27.TU.AmTr_v1.0_scaffold00038.89

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBC-conjugating E2 protein


Gene families : OG0001369 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001369_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00038p00146240
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Adi_g074544 UBC5 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g17066 UBC5 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.02 OrthoFinder output from all 47 species
Msp_g48715 UBC5 E2 ubiquitin-conjugating enzyme *(UBC4) & original... 0.02 OrthoFinder output from all 47 species
Smo81550 UBC5 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016881 acid-amino acid ligase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
CC GO:0030915 Smc5-Smc6 complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0106068 SUMO ligase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 12 142
No external refs found!