AMTR_s00038p00094720 (PEP,...)

Aliases : PEP, evm_27.TU.AmTr_v1.0_scaffold00038.46

Description : RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana

Gene families : OG0001316 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001316_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00038p00094720
Cluster	HCCA: Cluster_89

Target	Alias	Description	ECC score	Gene Family Method	Actions
Aspi01Gene20421.t1	FLK, Aspi01Gene20421	regulatory protein *(PEP) of autonomous floral-promotion...	0.02	OrthoFinder output from all 47 species
Cba_g18547	FLK	regulatory protein *(PEP) of autonomous floral-promotion...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004088	KH_dom_type_1	30	94

External Links

No external refs found!