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  5. AMTR_s00036p00211410

AMTR_s00036p00211410 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00036.134

Description : RNA biosynthesis.transcriptional activation.GRAS transcription factor


Gene families : OG0003436 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003436_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00036p00211410

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00212000 SCR, SGR1,... RNA biosynthesis.transcriptional activation.GRAS... 0.04 OrthoFinder output from all 47 species
AMTR_s04794p00002520 SCR, SGR1,... RNA biosynthesis.transcriptional activation.GRAS... 0.04 OrthoFinder output from all 47 species
AT3G54220 SCR, SGR1 GRAS family transcription factor 0.04 OrthoFinder output from all 47 species
Aev_g03339 SCR, SGR1 gravity signalling transcription factor *(SCR) &... 0.02 OrthoFinder output from all 47 species
Dac_g23463 SCR, SGR1 gravity signalling transcription factor *(SCR) &... 0.03 OrthoFinder output from all 47 species
Dde_g11938 SCR, SGR1 gravity signalling transcription factor *(SCR) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01029824001 SCR, SGR1 External stimuli response.gravity.sensing and... 0.02 OrthoFinder output from all 47 species
LOC_Os05g40710.1 RGA2, GAI, LOC_Os05g40710 transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species
Lfl_g19751 SCR, SGR1 gravity signalling transcription factor *(SCR) &... 0.03 OrthoFinder output from all 47 species
Solyc09g066450.3.1 SCR, SGR1, Solyc09g066450 transcription factor (GRAS) 0.04 OrthoFinder output from all 47 species
Solyc10g074680.2.1 SCR, SGR1, Solyc10g074680 transcription factor (GRAS). SCR gravity signalling... 0.06 OrthoFinder output from all 47 species
Spa_g08011 SCR, SGR1 gravity signalling transcription factor *(SCR) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009690 cytokinin metabolic process IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0019139 cytokinin dehydrogenase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!