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Aliases : evm_27.TU.AmTr_v1.0_scaffold00036.131
Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL28 component
Gene families : OG0000910 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000910_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G19730 | No alias | Ribosomal L28e protein family | 0.12 | OrthoFinder output from all 47 species | |
| AT4G29410 | No alias | Ribosomal L28e protein family | 0.1 | OrthoFinder output from all 47 species | |
| Adi_g025177 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g03520 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g00426 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g19634 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g23593 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g35479 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g00977 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g66247 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.25G035500.1 | Ceric.25G035500 | component *(eL28) of large ribosomal-subunit (LSU)... | 0.1 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020710.93 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Cre11.g467578 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.09 | OrthoFinder output from all 47 species | |
| Dac_g26158 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g14613 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01016895001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01035350001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_38783 | No alias | component RPL28 of LSU proteome component | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os02g57540.1 | LOC_Os02g57540 | component RPL28 of LSU proteome component | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os05g46430.1 | LOC_Os05g46430 | component RPL28 of LSU proteome component | 0.1 | OrthoFinder output from all 47 species | |
| Lfl_g00141 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g24992 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| MA_10428490g0010 | No alias | component RPL28 of LSU proteome component | 0.06 | OrthoFinder output from all 47 species | |
| Mp1g26940.1 | No alias | component RPL28 of LSU proteome component | 0.09 | OrthoFinder output from all 47 species | |
| Msp_g10686 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g36633 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g38772 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g01990 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g03637 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g60467 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Pp3c14_10480V3.1 | Pp3c14_10480 | Ribosomal L28e protein family | 0.08 | OrthoFinder output from all 47 species | |
| Pp3c17_14060V3.1 | Pp3c17_14060 | Ribosomal L28e protein family | 0.1 | OrthoFinder output from all 47 species | |
| Pp3c2_6100V3.1 | Pp3c2_6100 | Ribosomal L28e protein family | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g19107 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g19271 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0275.g027057 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g05292 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g05465 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g06118 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g06119 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g18296 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g43777 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g46660 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g46661 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Smo164298 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc03g121330.3.1 | Solyc03g121330 | component RPL28 of LSU proteome component | 0.07 | OrthoFinder output from all 47 species | |
| Solyc06g062500.4.1 | Solyc06g062500 | component RPL28 of LSU proteome component | 0.05 | OrthoFinder output from all 47 species | |
| Solyc12g044720.2.1 | Solyc12g044720 | component RPL28 of LSU proteome component | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g19251 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g21825 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.12 | OrthoFinder output from all 47 species | |
| Tin_g35509 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e026410_P001 | Zm00001e026410 | component RPL28 of LSU proteome component | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e032283_P002 | Zm00001e032283 | component RPL28 of LSU proteome component | 0.1 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003697 | single-stranded DNA binding | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004298 | threonine-type endopeptidase activity | IEP | HCCA |
| CC | GO:0005839 | proteasome core complex | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| MF | GO:0070003 | threonine-type peptidase activity | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |