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  5. AMTR_s00036p00194520

AMTR_s00036p00194520 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00036.107

Description : Protein translocation.endoplasmic reticulum.co-translational insertion system.Sec61 subcomplex.beta subunit


Gene families : OG0003689 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003689_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00036p00194520
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AT2G45070 SEC61 BETA Preprotein translocase Sec, Sec61-beta subunit protein 0.03 OrthoFinder output from all 47 species
AT5G60460 No alias Preprotein translocase Sec, Sec61-beta subunit protein 0.04 OrthoFinder output from all 47 species
LOC_Os12g07490.1 LOC_Os12g07490 subunit beta of co-translational insertion system Sec61... 0.04 OrthoFinder output from all 47 species
Mp3g20910.1 No alias subunit beta of co-translational insertion system Sec61... 0.03 OrthoFinder output from all 47 species
Pp3c19_6510V3.1 Pp3c19_6510 Preprotein translocase Sec, Sec61-beta subunit protein 0.03 OrthoFinder output from all 47 species
Smo39587 No alias Protein translocation.endoplasmic... 0.03 OrthoFinder output from all 47 species
Zm00001e027757_P001 Zm00001e027757 subunit beta of co-translational insertion system Sec61... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!