1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00036p00192320

AMTR_s00036p00192320 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00036.104

Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS30 component


Gene families : OG0002477 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002477_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00036p00192320

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001003.33 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 OrthoFinder output from all 47 species
GSVIVT01016902001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder output from all 47 species
MA_10432727g0010 No alias component RPS30 of SSU proteome 0.02 OrthoFinder output from all 47 species
Pp3c1_420V3.1 Pp3c1_420 Ribosomal protein S30 family protein 0.01 OrthoFinder output from all 47 species
Smo227173 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular anatomical structure IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
InterPro domains Description Start Stop
IPR006846 Ribosomal_S30 3 60
No external refs found!