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  5. AMTR_s00036p00183970

AMTR_s00036p00183970 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00036.94

Description : Jacalin-related lectin 19 OS=Arabidopsis thaliana


Gene families : OG0001384 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001384_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00036p00183970

Target Alias Description ECC score Gene Family Method Actions
AT1G52000 No alias Mannose-binding lectin superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G73040 No alias Mannose-binding lectin superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G16420 PBP1, JAL30 PYK10-binding protein 1 0.03 OrthoFinder output from all 47 species
AT3G16430 JAL31 jacalin-related lectin 31 0.03 OrthoFinder output from all 47 species
AT3G16440 MLP-300B, MEE36,... myrosinase-binding protein-like protein-300B 0.03 OrthoFinder output from all 47 species
AT3G16450 No alias Mannose-binding lectin superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G16460 No alias Mannose-binding lectin superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G16470 JR1 Mannose-binding lectin superfamily protein 0.03 OrthoFinder output from all 47 species
Aspi01Gene66667.t1 Aspi01Gene66667 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016899001 No alias Jacalin-related lectin 19 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01016900001 No alias Jacalin-related lectin 19 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Gb_05303 RTM1 Jacalin-related lectin 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_08638 No alias Jacalin-related lectin 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_20108 No alias Jacalin-related lectin 3 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os01g25160.1 LOC_Os01g25160 Salt stress-induced protein OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
LOC_Os03g28170.1 LOC_Os03g28170 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g26320.1 LOC_Os04g26320 Jacalin-related lectin 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os10g04270.1 LOC_Os10g04270 Horcolin OS=Hordeum vulgare subsp. vulgare... 0.05 OrthoFinder output from all 47 species
LOC_Os12g05020.1 LOC_Os12g05020 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_42495g0010 No alias Jacalin-related lectin 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_43124g0010 No alias Jacalin-related lectin 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_473550g0010 No alias Jacalin-related lectin 19 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_6521560g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_769268g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g40698 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g006240.3.1 JAL31, Solyc01g006240 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc03g121300.2.1 Solyc03g121300 Jacalin-related lectin 19 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Solyc09g090445.1.1 Solyc09g090445 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc10g078600.3.1 Solyc10g078600 Jacalin-related lectin 3 OS=Arabidopsis thaliana... 0.1 OrthoFinder output from all 47 species
Zm00001e009589_P002 Zm00001e009589 Horcolin OS=Hordeum vulgare subsp. vulgare... 0.03 OrthoFinder output from all 47 species
Zm00001e026409_P002 Zm00001e026409 Jacalin-related lectin 19 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e032084_P001 Zm00001e032084 Jacalin-related lectin 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e038016_P001 Zm00001e038016 Horcolin OS=Hordeum vulgare subsp. vulgare... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004871 obsolete signal transducer activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
InterPro domains Description Start Stop
IPR001229 Jacalin-like_lectin_dom 3 92
No external refs found!