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  5. AMTR_s00036p00155950

AMTR_s00036p00155950 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00036.74

No description available


Gene families : OG0000872 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000872_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00036p00155950

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00044470 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT4G09890 No alias Protein of unknown function (DUF3511) 0.03 OrthoFinder output from all 47 species
Aev_g32257 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g23611 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g34043 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00318 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g31744 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene09473.t1 Aspi01Gene09473 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60651.t1 Aspi01Gene60651 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G034600.1 Ceric.02G034600 not classified & original description: pacid=50586050... 0.03 OrthoFinder output from all 47 species
Ceric.26G000600.1 Ceric.26G000600 not classified & original description: pacid=50599959... 0.03 OrthoFinder output from all 47 species
Ceric.36G046200.1 Ceric.36G046200 not classified & original description: pacid=50568842... 0.03 OrthoFinder output from all 47 species
Dcu_g35746 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g01850 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_08501 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g38660.1 LOC_Os01g38660 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ore_g30526 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g24504 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0079.g017834 No alias not classified & original description: CDS=352-711 0.02 OrthoFinder output from all 47 species
Solyc08g062810.1.1 Solyc08g062810 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g11578 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g11579 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR021899 DUF3511 74 119
No external refs found!