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  5. AMTR_s00035p00061080

AMTR_s00035p00061080 (ATCXXS1, CXXS1,...)


Aliases : ATCXXS1, CXXS1, evm_27.TU.AmTr_v1.0_scaffold00035.7

Description : Redox homeostasis.cytosol/mitochondrion/nucleus redox homeostasis.H-type thioredoxin


Gene families : OG0000082 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000082_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00035p00061080
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AT1G11530 ATCXXS1, CXXS1 C-terminal cysteine residue is changed to a serine 1 0.03 OrthoFinder output from all 47 species
Ala_g09819 ATTRX4, ATH4 H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020944.12 ATH9, TH9, TRX H9 Redox homeostasis.cytosol/mitochondrion/nucleus redox... 0.01 OrthoFinder output from all 47 species
Gb_08866 ATCXXS1, CXXS1 H-type thioredoxin 0.03 OrthoFinder output from all 47 species
Len_g20806 TRXF2, ATF2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26679 ATTRX1, ATTRX H1, TRX1 H-type thioredoxin *(Trx-H) & original description: none 0.03 OrthoFinder output from all 47 species
MA_94546g0010 ATCXXS1, CXXS1 H-type thioredoxin 0.02 OrthoFinder output from all 47 species
Msp_g34873 ATHM4, TRX-M4, ATM4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g39148 ATTRX4, ATH4 H-type thioredoxin *(Trx-H) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g40531 ATTRX1, ATTRX H1, TRX1 H-type thioredoxin *(Trx-H) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g00509 TRXH2, TRX2,... H-type thioredoxin *(Trx-H) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02496 ATTRX1, ATTRX H1, TRX1 H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g52760 TRXH2, TRX2,... H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g084710.3.1 ATTRX1, ATTRX... H-type thioredoxin. protein-S-nitrosothiol reductase (TRX5) 0.02 OrthoFinder output from all 47 species
Spa_g19928 ATTRX1, ATTRX H1, TRX1 H-type thioredoxin *(Trx-H) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0045454 cell redox homeostasis IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0016987 sigma factor activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 32 115
No external refs found!