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  5. AMTR_s00034p00233920

AMTR_s00034p00233920 (TT5, CFI, A11,...)


Aliases : TT5, CFI, A11, evm_27.TU.AmTr_v1.0_scaffold00034.116

Description : Secondary metabolism.phenolics.flavonoid synthesis and modification.chalcone isomerase


Gene families : OG0005178 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005178_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00034p00233920
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AT3G55120 TT5, CFI, A11 Chalcone-flavanone isomerase family protein 0.09 OrthoFinder output from all 47 species
Als_g51543 TT5, CFI, A11 EC_5.5 intramolecular lyase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08047 TT5, CFI, A11 EC_5.5 intramolecular lyase & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g29988 TT5, CFI, A11 EC_5.5 intramolecular lyase & original description: none 0.04 OrthoFinder output from all 47 species
MA_118809g0010 TT5, CFI, A11 chalcone isomerase 0.03 OrthoFinder output from all 47 species
Mp6g05290.1 TT5, CFI, A11 chalcone isomerase 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005184 TT5, CFI, A11 EC_5.5 intramolecular lyase & original description: CDS=1-771 0.02 OrthoFinder output from all 47 species
Solyc05g010320.4.1 TT5, CFI, A11,... chalcone isomerase 0.04 OrthoFinder output from all 47 species
Spa_g12792 TT5, CFI, A11 EC_5.5 intramolecular lyase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016872 intramolecular lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
InterPro domains Description Start Stop
IPR016087 Chalcone_isomerase 17 214
No external refs found!