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  5. AMTR_s00033p00232360

AMTR_s00033p00232360 (DYAD, SWI1,...)


Aliases : DYAD, SWI1, evm_27.TU.AmTr_v1.0_scaffold00033.230

Description : Cell cycle.mitosis and meiosis.meiotic recombination.meiotic initiation.DYAD/SWI1 regulating protein


Gene families : OG0003886 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003886_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00033p00232360
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Dac_g00920 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001705001 VAMP726, ATVAMP726 No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01003609001 DYAD, SWI1 Cell cycle.mitosis and meiosis.meiotic... 0.03 OrthoFinder output from all 47 species
LOC_Os03g44760.1 DYAD, SWI1,... DYAD/SWI1 meiotic recombination regulating protein 0.04 OrthoFinder output from all 47 species
LOC_Os12g42820.1 DYAD, SWI1,... DYAD/SWI1 meiotic recombination regulating protein 0.02 OrthoFinder output from all 47 species
LOC_Os12g42830.1 DYAD, SWI1,... DYAD/SWI1 meiotic recombination regulating protein 0.02 OrthoFinder output from all 47 species
Smo404503 DYAD, SWI1 Cell cycle.mitosis and meiosis.meiotic... 0.03 OrthoFinder output from all 47 species
Solyc03g093370.2.1 DYAD, SWI1,... DYAD/SWI1 meiotic recombination regulating protein 0.02 OrthoFinder output from all 47 species
Spa_g49981 DYAD, SWI1 regulatory protein *(DYAD/SWI1) of meiotic recombination... 0.02 OrthoFinder output from all 47 species
Zm00001e003276_P001 DYAD, SWI1,... DYAD/SWI1 meiotic recombination regulating protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!