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  5. AMTR_s00033p00218160

AMTR_s00033p00218160 (ESD1, ARP6, SUF3,...)


Aliases : ESD1, ARP6, SUF3, ATARP6, evm_27.TU.AmTr_v1.0_scaffold00033.197

Description : Actin-related protein 6 OS=Oryza sativa subsp. indica


Gene families : OG0006503 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006503_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00033p00218160
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Len_g02776 ESD1, ARP6, SUF3, ATARP6 component *(ARP6) of SWR1 chromatin remodeling complex &... 0.02 OrthoFinder output from all 47 species
Len_g44347 ESD1, ARP6, SUF3, ATARP6 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP HCCA
BP GO:0000077 DNA damage checkpoint signaling IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
BP GO:0006184 obsolete GTP catabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0010948 negative regulation of cell cycle process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0030896 checkpoint clamp complex IEP HCCA
BP GO:0031570 DNA integrity checkpoint signaling IEP HCCA
BP GO:0042770 signal transduction in response to DNA damage IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0045786 negative regulation of cell cycle IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051258 protein polymerization IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901988 negative regulation of cell cycle phase transition IEP HCCA
InterPro domains Description Start Stop
IPR004000 Actin 4 443
No external refs found!