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  5. AMTR_s00033p00175020

AMTR_s00033p00175020 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00033.124

Description : Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana


Gene families : OG0000069 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00033p00175020

Target Alias Description ECC score Gene Family Method Actions
Adi_g000730 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g018210 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g043115 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g25350 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09317 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g01928 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29519 No alias UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G016400.1 Ceric.03G016400 UMF23-type solute transporter & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.04G037700.1 Ceric.04G037700 UMF23-type solute transporter & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.18G056400.1 Ceric.18G056400 UMF23-type solute transporter & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.31G002600.1 Ceric.31G002600 UMF23-type solute transporter & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g11008 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g01425 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Gb_26168 No alias anion transporter (Fabaceae-N70) 0.03 OrthoFinder output from all 47 species
LOC_Os07g09010.1 LOC_Os07g09010 anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
LOC_Os12g44180.1 LOC_Os12g44180 anion transporter (Fabaceae-N70) 0.04 OrthoFinder output from all 47 species
MA_116104g0010 No alias anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
MA_37457g0010 No alias anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
MA_40195g0010 No alias anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
MA_9061214g0010 No alias anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
Ore_g17268 No alias UMF23-type solute transporter & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g36675 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g58046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g11014 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11993 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g62356 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001188 No alias UMF23-type solute transporter & original description: CDS=1-4125 0.02 OrthoFinder output from all 47 species
Sam_g09308 No alias UMF23-type solute transporter & original description: none 0.04 OrthoFinder output from all 47 species
Smo62386 No alias Protein NUCLEAR FUSION DEFECTIVE 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc02g068140.3.1 Solyc02g068140 anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species
Spa_g08822 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23446 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g52118 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g26859 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006027_P001 Zm00001e006027 anion transporter (Fabaceae-N70) 0.01 OrthoFinder output from all 47 species
Zm00001e007652_P001 Zm00001e007652 anion transporter (Fabaceae-N70) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR010658 Nodulin-like 11 258
No external refs found!