1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00033p00156850

AMTR_s00033p00156850 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00033.102

No description available


Gene families : OG0003745 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003745_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00033p00156850
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
Adi_g014242 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g12000 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12304 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.31G026400.1 Ceric.31G026400 not classified & original description: pacid=50575060... 0.03 OrthoFinder output from all 47 species
Dac_g32473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06185 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g26916 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01029432001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01035929001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_09005 No alias no description available(sp|d5lxj0|cip73_lotja : 275.0) 0.02 OrthoFinder output from all 47 species
Gb_30758 No alias no description available(sp|d5lxj0|cip73_lotja : 374.0) 0.02 OrthoFinder output from all 47 species
MA_10437085g0010 No alias no description available(sp|d5lxj0|cip73_lotja : 126.0) 0.03 OrthoFinder output from all 47 species
Msp_g15179 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25836 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30986 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19466 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g082160.4.1 Solyc04g082160 no description available(sp|d5lxj0|cip73_lotja : 145.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
BP GO:0140352 export from cell IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 28 95
No external refs found!