AMTR_s00033p00112490 (TOR2, TUA4,...)

Aliases : TOR2, TUA4, evm_27.TU.AmTr_v1.0_scaffold00033.52

Description : Cytoskeleton.microtubular network.alpha-beta-Tubulin heterodimer.alpha-Tubulin component

Gene families : OG0000233 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000233_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00033p00112490

Target	Alias	Description	ECC score	Gene Family Method
AT1G04820	TOR2, TUA4	tubulin alpha-4 chain	0.03	OrthoFinder output from all 47 species
AT1G50010	TUA2	tubulin alpha-2 chain	0.05	OrthoFinder output from all 47 species
AT4G14960	TUA6	Tubulin/FtsZ family protein	0.03	OrthoFinder output from all 47 species
AT5G19770	TUA3	tubulin alpha-3	0.03	OrthoFinder output from all 47 species
Adi_g017319	TOR2, TUA4	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Adi_g022919	TUA6	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Adi_g065606	TUA6	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Adi_g088318	TOR2, TUA4	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Aev_g05984	TUA3	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Ceric.12G037900.1	TUA3, Ceric.12G037900	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.08	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000237.34	TOR2, TUA4	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000404.34	TOR2, TUA4	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Cre03.g190950	TOR2, TUA4	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Cre04.g216850	TOR2, TUA4	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Dac_g12327	TOR2, TUA4	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.05	OrthoFinder output from all 47 species
Dac_g22398	TOR2, TUA4	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Dcu_g13468	TUA3	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Dcu_g17258	TOR2, TUA4	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Dde_g08800	TOR2, TUA4	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
GSVIVT01009258001	TOR2, TUA4	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
LOC_Os03g51600.1	TOR2, TUA4,...	component alpha-Tubulin of alpha-beta-Tubulin heterodimer	0.03	OrthoFinder output from all 47 species
Len_g12227	TOR2, TUA4	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.05	OrthoFinder output from all 47 species
Len_g12228	TOR2, TUA4	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
MA_184192g0010	TOR2, TUA4	component alpha-Tubulin of alpha-beta-Tubulin heterodimer	0.04	OrthoFinder output from all 47 species
Mp1g24530.1	TOR2, TUA4	component alpha-Tubulin of alpha-beta-Tubulin heterodimer	0.03	OrthoFinder output from all 47 species
Mp2g23500.1	TOR2, TUA4	component alpha-Tubulin of alpha-beta-Tubulin heterodimer	0.02	OrthoFinder output from all 47 species
Mp4g00550.1	TUA3	component alpha-Tubulin of alpha-beta-Tubulin heterodimer	0.03	OrthoFinder output from all 47 species
Nbi_g21214	TUA6	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Pir_g03063	TOR2, TUA4	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Pp3c25_1010V3.1	TUA3, Pp3c25_1010	tubulin alpha-5	0.03	OrthoFinder output from all 47 species
Ppi_g28726	TOR2, TUA4	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.11	OrthoFinder output from all 47 species
Ppi_g35812	TUA6	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Sam_g09431	No alias	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Sam_g16657	No alias	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Sam_g16658	No alias	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Sam_g35588	No alias	alpha-Tubulin component *(TUA) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Smo100162	TOR2, TUA4	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.05	OrthoFinder output from all 47 species
Smo227365	TOR2, TUA4	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Smo404672	TOR2, TUA4	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Spa_g47009	TUA6	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e011939_P002	TUA6, Zm00001e011939	component alpha-Tubulin of alpha-beta-Tubulin heterodimer	0.03	OrthoFinder output from all 47 species
Zm00001e035332_P001	TUA3, Zm00001e035332	component alpha-Tubulin of alpha-beta-Tubulin heterodimer	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
BP	GO:0006184	obsolete GTP catabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0051258	protein polymerization	IEA	Interproscan
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR018316	Tubulin/FtsZ_2-layer-sand-dom	263	393
IPR003008	Tubulin_FtsZ_GTPase	3	225

External Links

No external refs found!

AMTR_s00033p00112490 (TOR2, TUA4,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation