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  5. AMTR_s00033p00078670

AMTR_s00033p00078670 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00033.35

Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0001148 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001148_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00033p00078670
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
Aob_g04366 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g23711 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_4761g0020 No alias transcription factor (bHLH). bHLH-IVa-class iron... 0.03 OrthoFinder output from all 47 species
Ore_g43870 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g31228 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g14377 NAI1 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g00716 No alias bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e000934_P001 Zm00001e000934 transcription factor (bHLH). bHLH-IVa-class iron... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0000156 phosphorelay response regulator activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 154 200
No external refs found!