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  5. AMTR_s00033p00020480

AMTR_s00033p00020480 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00033.6

Description : E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana


Gene families : OG0000599 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000599_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00033p00020480

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00148p00068590 evm_27.TU.AmTr_v1... E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT4G37890 EDA40 Zinc finger (C3HC4-type RING finger) family protein 0.06 OrthoFinder output from all 47 species
AT5G49665 No alias Zinc finger (C3HC4-type RING finger) family protein 0.03 OrthoFinder output from all 47 species
Als_g15196 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46085.t1 Aspi01Gene46085 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0206.g057816 No alias not classified & original description: CDS=364-2808 0.03 OrthoFinder output from all 47 species
Ceric.09G060200.1 Ceric.09G060200 not classified & original description: pacid=50588484... 0.03 OrthoFinder output from all 47 species
Cre12.g500550 No alias No description available 0.02 OrthoFinder output from all 47 species
Dde_g38041 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10552 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009240001 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_01603 No alias ubiquitin protein ligase (WAV3) 0.04 OrthoFinder output from all 47 species
LOC_Os03g04890.1 LOC_Os03g04890 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os10g32760.1 LOC_Os10g32760 Probable E3 ubiquitin-protein ligase WAVH2... 0.05 OrthoFinder output from all 47 species
LOC_Os12g24390.1 LOC_Os12g24390 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_11225g0010 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_218345g0010 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_2719537g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Msp_g24649 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g08356 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15216 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14357 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g14647 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g50317 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53269 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g02842 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000344_P001 Zm00001e000344 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e004621_P001 Zm00001e004621 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e010994_P001 Zm00001e010994 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e012729_P001 Zm00001e012729 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e023647_P001 Zm00001e023647 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004806 triglyceride lipase activity IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016597 amino acid binding IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 145 192
IPR002035 VWF_A 317 482
No external refs found!