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  5. AMTR_s00033p00020260

AMTR_s00033p00020260 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00033.5

Description : Protein RMD5 homolog OS=Arabidopsis thaliana


Gene families : OG0002380 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002380_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00033p00020260
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
Adi_g011283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20501 No alias E3 ubiquitin ligase component *(GID2) of GID... 0.03 OrthoFinder output from all 47 species
Lfl_g14730 No alias E3 ubiquitin ligase component *(GID2) of GID... 0.03 OrthoFinder output from all 47 species
Sam_g00549 No alias E3 ubiquitin ligase component *(GID2) of GID... 0.02 OrthoFinder output from all 47 species
Solyc02g091720.2.1 Solyc02g091720 catalytic component GID2 of ubiquitin protein ligase complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR024964 CTLH/CRA 152 294
IPR027370 Znf-RING_euk 322 374
No external refs found!