AMTR_s00032p00211660 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00032.205

Description : Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.epsilon subunit

Gene families : OG0004408 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004408_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00032p00211660

Target	Alias	Description	ECC score	Gene Family Method
Aob_g06408	No alias	subunit epsilon of coat protein complex & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene16272.t1	Aspi01Gene16272	subunit epsilon of coat protein complex & original...	0.02	OrthoFinder output from all 47 species
Ceric.10G089800.1	Ceric.10G089800	subunit epsilon of coat protein complex & original...	0.03	OrthoFinder output from all 47 species
Dcu_g00711	No alias	subunit epsilon of coat protein complex & original...	0.05	OrthoFinder output from all 47 species
Dde_g11510	No alias	subunit epsilon of coat protein complex & original...	0.03	OrthoFinder output from all 47 species
LOC_Os04g52270.1	LOC_Os04g52270	subunit epsilon of coat protein complex	0.03	OrthoFinder output from all 47 species
Zm00001e041631_P001	Zm00001e041631	subunit epsilon of coat protein complex	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
CC	GO:0030117	membrane coat	None	Extended
CC	GO:0030120	vesicle coat	None	Extended
CC	GO:0030126	COPI vesicle coat	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0048193	Golgi vesicle transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0019725	cellular homeostasis	IEP	HCCA
BP	GO:0042592	homeostatic process	IEP	HCCA
BP	GO:0045454	cell redox homeostasis	IEP	HCCA
MF	GO:0048037	obsolete cofactor binding	IEP	HCCA
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006822	Coatomer_esu	4	288

External Links

No external refs found!