1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00032p00186620

AMTR_s00032p00186620 (3-Oct, ATOCT3,...)


Aliases : 3-Oct, ATOCT3, evm_27.TU.AmTr_v1.0_scaffold00032.165

Description : Solute transport.carrier-mediated transport.MFS superfamily.OCT family.organic cation transporter (OCT-type)


Gene families : OG0001321 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001321_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00032p00186620
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
AT1G73220 AtOCT1, 1-Oct organic cation/carnitine transporter1 0.03 OrthoFinder output from all 47 species
Adi_g045207 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g086045 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37990 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g17094 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.11G036300.1 AtOCT4, 4-Oct,... organic cation transporter *(OCT) & original... 0.05 OrthoFinder output from all 47 species
Ceric.22G012900.1 AtOCT4, 4-Oct,... organic cation transporter *(OCT) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g10267 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04747 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_31020 AtOCT1, 1-Oct organic cation transporter (OCT) 0.02 OrthoFinder output from all 47 species
LOC_Os07g37530.1 2-Oct, ATOCT2,... organic cation transporter (OCT) 0.02 OrthoFinder output from all 47 species
Lfl_g31029 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g39356 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g40550 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10436973g0010 AtOCT1, 1-Oct organic cation transporter (OCT) 0.03 OrthoFinder output from all 47 species
MA_29857g0020 AtOCT1, 1-Oct organic cation transporter (OCT) 0.03 OrthoFinder output from all 47 species
Ore_g31037 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013039 AtOCT4, 4-Oct organic cation transporter *(OCT) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013040 AtOCT4, 4-Oct organic cation transporter *(OCT) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013041 AtOCT4, 4-Oct organic cation transporter *(OCT) & original... 0.02 OrthoFinder output from all 47 species
Solyc05g053860.4.1 3-Oct, ATOCT3,... organic cation transporter (OCT) 0.04 OrthoFinder output from all 47 species
Solyc07g063920.3.1 AtOCT4, 4-Oct,... organic cation transporter (OCT) 0.03 OrthoFinder output from all 47 species
Solyc12g017380.3.1 3-Oct, ATOCT3,... organic cation transporter (OCT) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004806 triglyceride lipase activity IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0047134 protein-disulfide reductase (NAD(P)) activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR005828 MFS_sugar_transport-like 2 373
No external refs found!