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  5. AMTR_s00032p00158580

AMTR_s00032p00158580 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00032.128

No description available


Gene families : OG0000313 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000313_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00032p00158580
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AT3G12870 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.07 OrthoFinder output from all 47 species
AT5G56120 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.07 OrthoFinder output from all 47 species
Gb_12879 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_10426247g0010 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
MA_457405g0010 No alias no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Sam_g13099 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc07g066540.1.1 Solyc07g066540 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e003437_P001 Zm00001e003437 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e011930_P001 Zm00001e011930 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000247 C-8 sterol isomerase activity IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006696 ergosterol biosynthetic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0008204 ergosterol metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009186 deoxyribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0016125 sterol metabolic process IEP HCCA
BP GO:0016126 sterol biosynthetic process IEP HCCA
BP GO:0016128 phytosteroid metabolic process IEP HCCA
BP GO:0016129 phytosteroid biosynthetic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0044107 cellular alcohol metabolic process IEP HCCA
BP GO:0044108 cellular alcohol biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0097384 cellular lipid biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
BP GO:1902652 secondary alcohol metabolic process IEP HCCA
BP GO:1902653 secondary alcohol biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!