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  5. AMTR_s00032p00095920

AMTR_s00032p00095920 (ATVAMP721, VAMP7B,...)


Aliases : ATVAMP721, VAMP7B, VAMP721, AT VAMP7B, evm_27.TU.AmTr_v1.0_scaffold00032.60

Description : Vesicle trafficking.SNARE target membrane recognition and fusion complexes.R-type SNARE longin components.VAMP7-type protein


Gene families : OG0000720 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000720_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00032p00095920
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
Aev_g07713 VAMP727, ATVAMP727 R-type VAMP7-group component of SNARE longin membrane... 0.04 OrthoFinder output from all 47 species
Aspi01Gene30423.t1 VAMP727,... R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Ceric.27G008700.1 VAMP727,... R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Cre04.g225900 ATVAMP725, VAMP725 Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species
Ehy_g06509 VAMP726, ATVAMP726 R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Gb_10498 ATVAMP725, VAMP725 R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.04 OrthoFinder output from all 47 species
LOC_Os07g09600.1 ATVAMP725,... R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.03 OrthoFinder output from all 47 species
Lfl_g00731 ATVAMP725, VAMP725 R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Ore_g05656 ATVAMP721,... R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Solyc02g069150.3.1 ATVAMP721,... R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0016192 vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
InterPro domains Description Start Stop
IPR001388 Synaptobrevin-like 129 177
IPR010908 Longin_dom 31 111
No external refs found!