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Aliases : evm_27.TU.AmTr_v1.0_scaffold00032.16
Description : Patellin-4 OS=Arabidopsis thaliana
Gene families : OG0000756 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000756_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00032p00036450 | |
| Cluster | HCCA: Cluster_17 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00070p00121170 | evm_27.TU.AmTr_v1... | Patellin-3 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| AT1G22530 | PATL2 | PATELLIN 2 | 0.04 | OrthoFinder output from all 47 species | |
| AT1G72160 | No alias | Sec14p-like phosphatidylinositol transfer family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G51670 | No alias | SEC14 cytosolic factor family protein / phosphoglyceride... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g112513 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g06939 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g39197 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g26093 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.03G077900.1 | Ceric.03G077900 | not classified & original description: pacid=50572716... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g08932 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g09471 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01000569001 | No alias | Patellin-6 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01028342001 | No alias | Patellin-4 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01036782001 | No alias | Patellin-4 OS=Arabidopsis thaliana | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os05g27820.1 | LOC_Os05g27820 | Patellin-6 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g35460.1 | LOC_Os05g35460 | Patellin-5 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| MA_9244g0010 | No alias | Patellin-5 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Mp4g16720.1 | No alias | Patellin-6 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g08891 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g13952 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g17352 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g24618 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g20165 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g070210.3.1 | Solyc02g070210 | Patellin-4 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g025230.4.1 | Solyc09g025230 | Patellin-5 OS=Arabidopsis thaliana... | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e026912_P001 | Zm00001e026912 | Patellin-6 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e031502_P004 | Zm00001e031502 | Patellin-6 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e031729_P005 | Zm00001e031729 | Patellin-5 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000428 | DNA-directed RNA polymerase complex | IEP | HCCA |
| MF | GO:0003725 | double-stranded RNA binding | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | HCCA |
| CC | GO:0005666 | RNA polymerase III complex | IEP | HCCA |
| BP | GO:0006383 | transcription by RNA polymerase III | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006470 | protein dephosphorylation | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| BP | GO:0016311 | dephosphorylation | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| MF | GO:0016791 | phosphatase activity | IEP | HCCA |
| CC | GO:0030880 | RNA polymerase complex | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| MF | GO:0050662 | obsolete coenzyme binding | IEP | HCCA |
| CC | GO:0055029 | nuclear DNA-directed RNA polymerase complex | IEP | HCCA |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| No external refs found! |