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  5. AMTR_s00031p00132350

AMTR_s00031p00132350 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00031.56

Description : Uncharacterized protein At3g28850 OS=Arabidopsis thaliana


Gene families : OG0000162 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000162_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00031p00132350
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AT5G01420 No alias Glutaredoxin family protein 0.06 OrthoFinder output from all 47 species
Adi_g002031 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18844 No alias actin filament-bundling factor *(THRUMIN) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene13967.t1 Aspi01Gene13967 actin filament-bundling factor *(THRUMIN) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0045.g029770 No alias not classified & original description: CDS=1-1350 0.05 OrthoFinder output from all 47 species
Azfi_s0230.g059138 No alias not classified & original description: CDS=1-1101 0.03 OrthoFinder output from all 47 species
Ceric.06G046800.1 Ceric.06G046800 actin filament-bundling factor *(THRUMIN) & original... 0.05 OrthoFinder output from all 47 species
Ceric.23G015000.1 Ceric.23G015000 not classified & original description: pacid=50610339... 0.02 OrthoFinder output from all 47 species
Dde_g26578 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01033855001 No alias Uncharacterized protein At5g39865 OS=Arabidopsis thaliana 0.14 OrthoFinder output from all 47 species
GSVIVT01034614001 No alias Uncharacterized protein At5g39865 OS=Arabidopsis thaliana 0.09 OrthoFinder output from all 47 species
LOC_Os03g44650.1 LOC_Os03g44650 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
LOC_Os04g33680.1 LOC_Os04g33680 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.14 OrthoFinder output from all 47 species
Len_g08448 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g10410 No alias actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g36864 No alias actin filament-bundling factor *(THRUMIN) & original... 0.09 OrthoFinder output from all 47 species
Pnu_g09294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007137 No alias not classified & original description: CDS=193-2466 0.05 OrthoFinder output from all 47 species
Solyc09g009860.1.1 Solyc09g009860 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Solyc11g006430.1.1 Solyc11g006430 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.15 OrthoFinder output from all 47 species
Spa_g10159 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g40274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g40509 No alias actin filament-bundling factor *(THRUMIN) & original... 0.13 OrthoFinder output from all 47 species
Tin_g13658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004996_P001 Zm00001e004996 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Zm00001e008195_P001 Zm00001e008195 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e012391_P001 Zm00001e012391 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e025414_P001 Zm00001e025414 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
MF GO:0015035 protein-disulfide reductase activity IEA Interproscan
BP GO:0045454 cell redox homeostasis IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR002109 Glutaredoxin 246 313
No external refs found!