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  5. AMTR_s00030p00096820

AMTR_s00030p00096820 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00030.41

Description : SKP1-interacting partner 15 OS=Arabidopsis thaliana


Gene families : OG0003992 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003992_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00030p00096820

Target Alias Description ECC score Gene Family Method Actions
Ala_g12390 No alias substrate adaptor *(BAF1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Aspi01Gene50101.t1 Aspi01Gene50101 substrate adaptor *(BAF1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Dde_g25314 HS, HWS substrate adaptor *(BAF1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA

No InterPro domains available for this sequence

No external refs found!