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  5. AMTR_s00029p00246370

AMTR_s00029p00246370 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00029.441

No description available


Gene families : OG0001688 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001688_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00029p00246370
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01009392001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01024737001 No alias No description available 0.05 OrthoFinder output from all 47 species
Len_g30630 No alias regulatory E3 ubiquitin ligase (APD) involved in... 0.03 OrthoFinder output from all 47 species
MA_10432900g0010 No alias no description available(sp|q6dbh0|apd2_arath : 91.7) 0.05 OrthoFinder output from all 47 species
MA_66746g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003913 DNA photolyase activity IEP HCCA
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!