AMTR_s00029p00242220 (ATPDR3, PDR3,...)

Aliases : ATPDR3, PDR3, evm_27.TU.AmTr_v1.0_scaffold00029.420

Description : Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter

Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00029p00242220

Target	Alias	Description	ECC score	Gene Family Method
Aob_g23935	PEN3, ABCG36,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g27569	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g28174	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g20185	ABCG40, PDR12,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01017198001	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
GSVIVT01017337001	ABCG40, PDR12,...	ABC transporter G family member 40 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
GSVIVT01031314001	PIS1, ABCG37,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
GSVIVT01031377001	PDR6, ATPDR6	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
GSVIVT01035785001	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
GSVIVT01035786001	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
Gb_37007	ABCG40, PDR12,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
LOC_Os01g52560.1	PEN3, ABCG36,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
MA_2168g0010	PDR4, ATPDR4	ABC transporter G family member 44 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
MA_878041g0010	PDR1, ATPDR1	ABC transporter G family member 29 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Ppi_g40984	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0120.g021403	ABCG40, PDR12,...	subfamily ABCG transporter & original description: CDS=3744-5723	0.02	OrthoFinder output from all 47 species
Smo101338	PDR6, ATPDR6	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Smo115821	PEN3, ABCG36,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Smo412710	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Smo424638	PDR11, ATPDR11	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Smo424639	PDR11, ATPDR11	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Solyc12g100190.2.1	ABCG40, PDR12,...	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
Tin_g31248	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006304	DNA modification	IEP	HCCA
BP	GO:0006305	DNA alkylation	IEP	HCCA
BP	GO:0006306	DNA methylation	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA
BP	GO:0043414	macromolecule methylation	IEP	HCCA
BP	GO:0044728	DNA methylation or demethylation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	898	1026
IPR003439	ABC_transporter-like_ATP-bd	196	353
IPR013581	PDR_assoc	725	789
IPR013525	ABC_2_trans	509	720
IPR013525	ABC_2_trans	1171	1384

External Links

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AMTR_s00029p00242220 (ATPDR3, PDR3,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation