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  5. AMTR_s00029p00219780

AMTR_s00029p00219780 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00029.335

Description : Protein modification.peptide maturation.endomembrane system.SPC endoplasmic signal peptidase complex.SPCs2 component


Gene families : OG0005036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00029p00219780
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Adi_g102718 No alias component *(SPCs2) of SPC endoplasmic signal peptidase... 0.03 OrthoFinder output from all 47 species
Aob_g04772 No alias component *(SPCs2) of SPC endoplasmic signal peptidase... 0.02 OrthoFinder output from all 47 species
Aspi01Gene22991.t1 Aspi01Gene22991 component *(SPCs2) of SPC endoplasmic signal peptidase... 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007949 No alias component *(SPCs2) of SPC endoplasmic signal peptidase... 0.03 OrthoFinder output from all 47 species
Cba_g30306 No alias component *(SPCs2) of SPC endoplasmic signal peptidase... 0.02 OrthoFinder output from all 47 species
Dac_g08152 No alias component *(SPCs2) of SPC endoplasmic signal peptidase... 0.03 OrthoFinder output from all 47 species
LOC_Os02g35720.1 LOC_Os02g35720 component SPCs2 of SPC endoplasmic signal peptidase complex 0.06 OrthoFinder output from all 47 species
LOC_Os04g36859.1 LOC_Os04g36859 component SPCs2 of SPC endoplasmic signal peptidase complex 0.02 OrthoFinder output from all 47 species
MA_17138g0010 No alias component SPCs2 of SPC endoplasmic signal peptidase complex 0.02 OrthoFinder output from all 47 species
Ore_g09658 No alias component *(SPCs2) of SPC endoplasmic signal peptidase... 0.02 OrthoFinder output from all 47 species
Pp3c8_24950V3.1 Pp3c8_24950 Microsomal signal peptidase 25 kDa subunit (SPC25) 0.02 OrthoFinder output from all 47 species
Spa_g15635 No alias component *(SPCs2) of SPC endoplasmic signal peptidase... 0.03 OrthoFinder output from all 47 species
Zm00001e007990_P001 Zm00001e007990 component SPCs2 of SPC endoplasmic signal peptidase complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005787 signal peptidase complex IEA Interproscan
BP GO:0006465 signal peptide processing IEA Interproscan
MF GO:0008233 peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR009582 Spc2/SPCS2 25 83
No external refs found!