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  5. AMTR_s00029p00213140

AMTR_s00029p00213140 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00029.314

Description : UPF0503 protein At3g09070, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0010713 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0010713_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00029p00213140

Target Alias Description ECC score Gene Family Method Actions
AT3G09070 No alias Protein of unknown function (DUF740) 0.09 OrthoFinder output from all 47 species
AT5G01170 No alias Protein of unknown function (DUF740) 0.03 OrthoFinder output from all 47 species
GSVIVT01034008001 No alias No description available 0.08 OrthoFinder output from all 47 species
LOC_Os01g63310.1 LOC_Os01g63310 no description available(sp|q9lfb9|opsl1_arath : 112.0) 0.06 OrthoFinder output from all 47 species
LOC_Os05g37800.1 LOC_Os05g37800 no description available(sp|q9lfb9|opsl1_arath : 113.0) 0.1 OrthoFinder output from all 47 species
Solyc06g076700.1.1 Solyc06g076700 no description available(sp|q9ss80|ops_arath : 107.0) 0.05 OrthoFinder output from all 47 species
Solyc09g014160.3.1 Solyc09g014160 no description available(sp|q9ss80|ops_arath : 249.0) 0.05 OrthoFinder output from all 47 species
Solyc10g085070.3.1 Solyc10g085070 no description available(sp|q9ss80|ops_arath : 275.0) 0.02 OrthoFinder output from all 47 species
Zm00001e019256_P001 Zm00001e019256 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Zm00001e026949_P001 Zm00001e026949 no description available(sp|q9ss80|ops_arath : 80.1) 0.06 OrthoFinder output from all 47 species
Zm00001e028737_P001 Zm00001e028737 no description available(sp|q9ss80|ops_arath : 130.0) 0.08 OrthoFinder output from all 47 species
Zm00001e031736_P001 Zm00001e031736 no description available(sp|q9ss80|ops_arath : 142.0) 0.07 OrthoFinder output from all 47 species
Zm00001e038979_P001 Zm00001e038979 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR008004 OCTOPUS-like 262 738
IPR008004 OCTOPUS-like 11 204
No external refs found!