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  5. AMTR_s00029p00203020

AMTR_s00029p00203020 (GIL1,...)


Aliases : GIL1, evm_27.TU.AmTr_v1.0_scaffold00029.289

Description : Protein GRAVITROPIC IN THE LIGHT 1 OS=Arabidopsis thaliana


Gene families : OG0000647 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000647_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00029p00203020
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AT3G60680 No alias Plant protein of unknown function (DUF641) 0.03 OrthoFinder output from all 47 species
Azfi_s0009.g011711 No alias not classified & original description: CDS=1-1905 0.02 OrthoFinder output from all 47 species
Cba_g43171 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g04718 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10977 No alias regulatory protein *(GIL1) of phytochrome-mediated... 0.02 OrthoFinder output from all 47 species
GSVIVT01024581001 No alias Protein GRAVITROPIC IN THE LIGHT 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01024812001 GIL1 Protein GRAVITROPIC IN THE LIGHT 1 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
Gb_30642 GIL1 regulator (GIL1) of phytochrome-mediated agravitropism 0.03 OrthoFinder output from all 47 species
LOC_Os03g61040.1 GIL1, LOC_Os03g61040 regulator (GIL1) of phytochrome-mediated agravitropism 0.04 OrthoFinder output from all 47 species
Len_g25977 No alias regulatory protein *(GIL1) of phytochrome-mediated... 0.04 OrthoFinder output from all 47 species
Msp_g09402 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g21636 GIL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30684 No alias regulatory protein *(GIL1) of phytochrome-mediated... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007179 No alias not classified & original description: CDS=435-2498 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0072.g016979 No alias not classified & original description: CDS=29-1618 0.03 OrthoFinder output from all 47 species
Solyc02g083110.1.1 GIL1, Solyc02g083110 regulator (GIL1) of phytochrome-mediated agravitropism 0.03 OrthoFinder output from all 47 species
Solyc07g062310.4.1 Solyc07g062310 Protein GRAVITROPIC IN THE LIGHT 1 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Spa_g53935 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23463 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e012578_P001 Zm00001e012578 Protein GRAVITROPIC IN THE LIGHT 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e031256_P001 Zm00001e031256 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!