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  5. AMTR_s00029p00116980

AMTR_s00029p00116980 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00029.129

Description : U-box domain-containing protein 62 OS=Arabidopsis thaliana


Gene families : OG0000864 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000864_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00029p00116980

Target Alias Description ECC score Gene Family Method Actions
Adi_g020571 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g024353 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g112813 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g32249 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32250 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18599 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64526.t1 Aspi01Gene64526 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0350.g066547 No alias E3 ubiquitin ligase & original description: CDS=532-2124 0.03 OrthoFinder output from all 47 species
Cba_g01219 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05312 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g15027 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g10909 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g01655 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Gb_03616 No alias U-box domain-containing protein 62 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Lfl_g19872 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g30807 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
MA_1898g0010 No alias U-box domain-containing protein 62 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Msp_g15259 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04419 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12854 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g32791 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08509 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012129 No alias E3 ubiquitin ligase & original description: CDS=296-2575 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g016014 No alias E3 ubiquitin ligase & original description: CDS=1-342 0.02 OrthoFinder output from all 47 species
Solyc04g009340.3.1 Solyc04g009340 U-box domain-containing protein 63 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g10167 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g16841 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g19082 No alias E3 ubiquiTin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016277_P001 Zm00001e016277 U-box domain-containing protein 63 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!