1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00029p00052430

AMTR_s00029p00052430 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00029.43

No description available


Gene families : OG0001460 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001460_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00029p00052430
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AT2G27180 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
AT3G01516 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.02 OrthoFinder output from all 47 species
Adi_g077742 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g37470 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06952 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os03g44750.1 LOC_Os03g44750 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g11860.1 LOC_Os04g11860 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g42650.1 LOC_Os12g42650 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g46432 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25389 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g081700.3.1 Solyc10g081700 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e012386_P001 Zm00001e012386 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0019205 nucleobase-containing compound kinase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!