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  5. AMTR_s00029p00049810

AMTR_s00029p00049810 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00029.38

Description : Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana


Gene families : OG0004302 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004302_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00029p00049810

Target Alias Description ECC score Gene Family Method Actions
AT1G06440 No alias Ubiquitin carboxyl-terminal hydrolase family protein 0.02 OrthoFinder output from all 47 species
AT4G33495 RPD1 Ubiquitin carboxyl-terminal hydrolase family protein 0.04 OrthoFinder output from all 47 species
Adi_g082348 RPD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01025854001 No alias Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Msp_g15269 RPD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30821 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03187 RPD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR021099 PORR_domain 104 447
No external refs found!