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  5. AMTR_s00029p00032490

AMTR_s00029p00032490 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00029.13

No description available


Gene families : OG0002286 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002286_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00029p00032490

Target Alias Description ECC score Gene Family Method Actions
AT1G61260 No alias Protein of unknown function (DUF761) 0.06 OrthoFinder output from all 47 species
Aev_g05350 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g21279 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene48347.t1 Aspi01Gene48347 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene70358.t1 Aspi01Gene70358 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.19G056900.1 Ceric.19G056900 not classified & original description: pacid=50576000... 0.03 OrthoFinder output from all 47 species
Gb_16002 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_651119g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Pnu_g02725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g28190 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo426993 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc03g006620.3.1 Solyc03g006620 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g00749 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g28054 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008480 DUF761_pln 306 343
IPR025520 DUF4408 49 81
No external refs found!