1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00028p00216930

AMTR_s00028p00216930 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00028.104

Description : Light-induced protein, chloroplastic OS=Solanum tuberosum


Gene families : OG0002240 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002240_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00028p00216930

Target Alias Description ECC score Gene Family Method Actions
AT4G04020 FIB fibrillin 0.02 OrthoFinder output from all 47 species
AT4G22240 No alias Plastid-lipid associated protein PAP / fibrillin family protein 0.02 OrthoFinder output from all 47 species
Ore_g27450 No alias Fibrillin plastoglobule core protein *(FBN1/2) &... 0.02 OrthoFinder output from all 47 species
Solyc02g081170.4.1 FIB, Solyc02g081170 Light-induced protein, chloroplastic OS=Solanum... 0.02 OrthoFinder output from all 47 species
Solyc08g005220.4.1 Solyc08g005220 Probable plastid-lipid-associated protein 3,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA Interproscan
CC GO:0009507 chloroplast IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004806 triglyceride lipase activity IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR006843 PAP/fibrillin_dom 94 310
No external refs found!