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  5. AMTR_s00028p00191210

AMTR_s00028p00191210 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00028.84

No description available


Gene families : OG0005217 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005217_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00028p00191210
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AT5G16920 No alias Fasciclin-like arabinogalactan family protein 0.14 OrthoFinder output from all 47 species
AT5G26730 No alias Fasciclin-like arabinogalactan family protein 0.14 OrthoFinder output from all 47 species
Aop_g69967 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ceric.13G083300.1 Ceric.13G083300 not classified & original description: pacid=50636070... 0.04 OrthoFinder output from all 47 species
Ceric.23G053000.1 Ceric.23G053000 not classified & original description: pacid=50610461... 0.05 OrthoFinder output from all 47 species
Dcu_g42757 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Gb_14995 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os12g13160.1 LOC_Os12g13160 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g33494 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10360g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_99914g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g46455 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04970 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g09562 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0197.g025505 No alias not classified & original description: CDS=1-1041 0.03 OrthoFinder output from all 47 species
Smo426331 No alias No description available 0.02 OrthoFinder output from all 47 species
Smo430281 No alias FAS1 domain-containing protein SELMODRAFT_448915... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0016020 membrane IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0050662 obsolete coenzyme binding IEP HCCA
MF GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity IEP HCCA
InterPro domains Description Start Stop
IPR000782 FAS1_domain 43 155
No external refs found!