AMTR_s00028p00159770 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00028.64

Description : Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana


Gene families : OG0000198 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000198_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00028p00159770

Target Alias Description ECC score Gene Family Method Actions
AT1G78520 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G35740 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G63225 No alias Carbohydrate-binding X8 domain superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G63240 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G63250 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g18704 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g25236 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g28990 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12127 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g25995 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g06893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g29533 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08402 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09349 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g30202 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g00460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05481 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.27G008500.1 Ceric.27G008500 not classified & original description: pacid=50604777... 0.02 OrthoFinder output from all 47 species
Dac_g03506 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g04433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37975 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g45823 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g30446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007873001 PDCB3 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01021412001 No alias Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum 0.03 OrthoFinder output from all 47 species
GSVIVT01030060001 No alias Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_14999 No alias Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_15010 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os01g55820.1 LOC_Os01g55820 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Len_g53541 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_210389g0010 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_962758g0010 No alias Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Msp_g29067 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g30042 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41343 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g37804 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g45427 PDCB2, E13L3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g18874 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16036 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g33619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g36355 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015092 No alias not classified & original description: CDS=288-854 0.02 OrthoFinder output from all 47 species
Smo29014 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo38968 No alias No description available 0.04 OrthoFinder output from all 47 species
Smo38969 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc07g062010.1.1 Solyc07g062010 Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum... 0.04 OrthoFinder output from all 47 species
Solyc09g091920.3.1 Solyc09g091920 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g20782 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002008_P001 PDCB2, E13L3,... Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e016347_P001 Zm00001e016347 Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea... 0.02 OrthoFinder output from all 47 species
Zm00001e021782_P001 Zm00001e021782 Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR012946 X8 33 104
No external refs found!