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  5. Aev_g06118

Aev_g06118 (LOS1)


Aliases : LOS1

Description : mRNA-translocation factor *(eEF2)) & original description: none


Gene families : OG0001393 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001393_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g06118
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
AT3G12915 No alias Ribosomal protein S5/Elongation factor G/III/V family protein 0.02 OrthoFinder output from all 47 species
Dac_g16205 LOS1 mRNA-translocation factor *(eEF2)) & original description: none 0.04 OrthoFinder output from all 47 species
Gb_14897 LOS1 mRNA-translocation factor (eEF2) 0.02 OrthoFinder output from all 47 species
Lfl_g12274 LOS1 mRNA-translocation factor *(eEF2)) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g23642 LOS1 mRNA-translocation factor *(eEF2)) & original description: none 0.02 OrthoFinder output from all 47 species
Mp2g20190.1 LOS1 mRNA-translocation factor (eEF2) 0.02 OrthoFinder output from all 47 species
Mp2g20200.1 LOS1 mRNA-translocation factor (eEF2) 0.02 OrthoFinder output from all 47 species
Pir_g09744 LOS1 mRNA-translocation factor *(eEF2)) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g15332 LOS1 mRNA-translocation factor *(eEF2)) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3s128_50V3.1 LOS1, Pp3s128_50 Ribosomal protein S5/Elongation factor G/III/V family protein 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009688 LOS1 mRNA-translocation factor *(eEF2)) & original... 0.02 OrthoFinder output from all 47 species
Solyc08g062920.3.1 LOS1, Solyc08g062920 mRNA-translocation factor (eEF2) 0.03 OrthoFinder output from all 47 species
Spa_g06405 LOS1 mRNA-translocation factor *(eEF2)) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06406 LOS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006293_P001 LOS1, Zm00001e006293 mRNA-translocation factor (eEF2) 0.03 OrthoFinder output from all 47 species
Zm00001e006294_P001 LOS1, Zm00001e006294 mRNA-translocation factor (eEF2) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR041095 EFG_II 487 549
IPR005517 Transl_elong_EFG/EF2_IV 610 722
IPR000795 T_Tr_GTP-bd_dom 17 342
IPR004161 EFTu-like_2 394 467
IPR000640 EFG_V-like 724 811
No external refs found!