1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00027p00217960

AMTR_s00027p00217960 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00027.81

Description : Rhodanese-like domain-containing protein 14, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0002035 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002035_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00027p00217960
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
AT4G27700 No alias Rhodanese/Cell cycle control phosphatase superfamily protein 0.11 OrthoFinder output from all 47 species
Adi_g020179 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aev_g04512 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16181 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g00617 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g01147 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g48949 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26252.t1 Aspi01Gene26252 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0047.g030254 No alias not classified & original description: CDS=115-861 0.05 OrthoFinder output from all 47 species
Cba_g10850 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.11G085200.1 Ceric.11G085200 not classified & original description: pacid=50595665... 0.06 OrthoFinder output from all 47 species
Cre01.g003550 No alias Rhodanese-like domain-containing protein 14,... 0.01 OrthoFinder output from all 47 species
Cre02.g111450 No alias No description available 0.13 OrthoFinder output from all 47 species
Cre16.g650050 No alias Rhodanese-like domain-containing protein 14,... 0.05 OrthoFinder output from all 47 species
Dac_g39012 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g18914 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g09713 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04254 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01038606001 No alias Rhodanese-like domain-containing protein 14,... 0.1 OrthoFinder output from all 47 species
Gb_06964 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_06965 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os09g36040.1 LOC_Os09g36040 Rhodanese-like domain-containing protein 14,... 0.04 OrthoFinder output from all 47 species
Len_g02673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g48931 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g00978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05177 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g22281 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_85383g0010 No alias Rhodanese-like domain-containing protein 14,... 0.07 OrthoFinder output from all 47 species
Mp3g12160.1 No alias Rhodanese-like domain-containing protein 14,... 0.03 OrthoFinder output from all 47 species
Mp6g02370.1 No alias Rhodanese-like domain-containing protein 14,... 0.04 OrthoFinder output from all 47 species
Msp_g05793 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g12006 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02721 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g03983 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g01836 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g05857 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g35161 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g08397 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08526 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g14984 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38865 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Smo174737 No alias Rhodanese-like domain-containing protein 14,... 0.07 OrthoFinder output from all 47 species
Smo417803 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc06g053140.3.1 Solyc06g053140 Rhodanese-like domain-containing protein 14,... 0.12 OrthoFinder output from all 47 species
Spa_g17716 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g18946 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0005960 glycine cleavage complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016987 sigma factor activity IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001763 Rhodanese-like_dom 87 220
No external refs found!