AMTR_s00027p00211720 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00027.75

Description : AAA-ATPase At2g46620 OS=Arabidopsis thaliana

Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00027p00211720

Target	Alias	Description	ECC score	Gene Family Method
Cba_g32806	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01032557001	AATP1	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
Gb_27547	No alias	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Solyc06g053150.1.1	Solyc06g053150	AAA-ATPase At2g46620 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Zm00001e004348_P001	Zm00001e004348	AAA-ATPase At2g46620 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005525	GTP binding	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
BP	GO:0007264	small GTPase mediated signal transduction	IEP	HCCA
BP	GO:0008150	biological_process	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	208	329
IPR025753	AAA_N_dom	21	105

External Links

No external refs found!