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  5. AMTR_s00025p00153820

AMTR_s00025p00153820 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00025.172

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.FBX component


Gene families : OG0003604 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003604_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00025p00153820

Target Alias Description ECC score Gene Family Method Actions
Ala_g01877 No alias substrate adaptor of SCF E3 ubiquitin ligase complex &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene10432.t1 Aspi01Gene10432 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001030.16 No alias No description available 0.01 OrthoFinder output from all 47 species
Zm00001e040068_P001 Zm00001e040068 component FBX of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003913 DNA photolyase activity IEP HCCA
MF GO:0004096 catalase activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!