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  5. AMTR_s00025p00122690

AMTR_s00025p00122690 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00025.112

Description : Membrane protein PM19L OS=Oryza sativa subsp. japonica


Gene families : OG0000473 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000473_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00025p00122690

Target Alias Description ECC score Gene Family Method Actions
Ceric.19G032900.1 Ceric.19G032900 not classified & original description: pacid=50575324... 0.03 OrthoFinder output from all 47 species
Ceric.37G005000.1 Ceric.37G005000 not classified & original description: pacid=50616787... 0.03 OrthoFinder output from all 47 species
Ceric.37G005200.1 Ceric.37G005200 not classified & original description: pacid=50615572... 0.03 OrthoFinder output from all 47 species
Dac_g01218 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08117 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_101266g0010 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_16601g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_7840101g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pnu_g18880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06734 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g080290.3.1 Solyc01g080290 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc02g071310.3.1 Solyc02g071310 Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
Spa_g02439 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29733 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g39083 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g12556 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR008390 AWPM-19 11 150
No external refs found!