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  5. AMTR_s00025p00092990

AMTR_s00025p00092990 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00025.74

No description available


Gene families : OG0014483 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0014483_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00025p00092990
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AT3G63095 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.14 OrthoFinder output from all 47 species
GSVIVT01011106001 No alias No description available 0.1 OrthoFinder output from all 47 species
LOC_Os03g24300.1 LOC_Os03g24300 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g46210.1 LOC_Os07g46210 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os08g27210.1 LOC_Os08g27210 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os09g13930.1 LOC_Os09g13930 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc09g064900.1.1 Solyc09g064900 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Zm00001e001719_P001 Zm00001e001719 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e004277_P001 Zm00001e004277 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e035736_P001 Zm00001e035736 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Zm00001e038170_P001 Zm00001e038170 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!